Saving multi-dimensional data

When saving multi-dimensional data (i.e. dynamic multi-slice or multi-echo multi - slice datasets), the images saved will depend on the image scroll-box setting (see  Sorting multi-dimensional datasets ). In general, the images saved will be equal to the active images defined by the image scroll-box setting; i.e. the images visible when scrolling through the image list. This is of particular importance when converting multi-dimensional data from DICOM to Nifti format. If the data represent a four-dimensional dataset and the image scroll-box selector is set to All, then multiple image volumes are created where each Nifti file contains all slices for a given time-point in the dynamic series (or echo in a multi-echo series). If the image scroll-box selector is set to Dyn. Scan, then all dynamic images for the current slice is saved (as one img/hdr file), and if set to Slice, then all slices for the current dynamic time-point is saved (as one Nifti file).

Related topics:

Saving images in Nifti format
Saving images in DICOM format
Sorting multi-dimensional datasets