ROI statistics

The ROI Statistics window

The ROI statistics dialog box is displayed when you choose the ROI ->Measure command on the Measure menu or when you choose ROI -> View -> ROI Statistics from the Measure menu.




ROI Size / ROI Position 

For rectangular and elliptical ROI s, the ROI size is displayed in the window. For other ROI types, this information is grayed out. Note that the ROI size and position can also be changed using the scroll bars to he right of each parameter. 

Whole image

Exand the ROI shape to the image borders.

ROI Source

Determines whether the ROI operation should be applied to the image overlay or the underlay (default). The image underlay is here equivalent to the loaded image set if no overlay is present. 

Hide Current ROI 

Temporarily hides the current ROI

Exclude zero value pixels 

Exclude pixels with a value of zero from the statistical ROI analysis. Since some functions in nordicICE will set pixel values to zero in response to certain criteria, this is a means of excluding such pixels from the ROI analysis. 

Active ROI shape:

Displays the name of the ROI type that is active.

ROI statistics

Displays the mean, standard deviation, max, min and median pixel values in the current ROI as well as the ROI area and volume. Note that, by default, the drawn ROI is applied to all the images in the volume and the volume of interest (VOI) is therefore, by default, calculated as ROI x slice thickness x No. of slices. The ROI shape, size and position can, however, be individually adjusted for each slice. See “ Advanced ROI functionality ”   for more details.

ROI Update Scope

Determines which images a given change in the current ROI is applied to. This is convenient if a given ROI should be applied to a subset of the images (e.g. current image to last image or current image to first image or just current image).

Hide ROIs

Removes multiple ROI s according to the setting of the ROI update scope parameter. 

Save ROI to Buffer

Adds the active ROI to the ROI Buffer, as described in “ Saving ROI data to the Buffer ”.

Save ROI pos:

            Saves the ROI object as a .roi file. This option allows a given ROI to be loaded back with the same properties (shape, size, position) as when it was saved.

Related topics:

Region of interest (ROI) Analysis
Saving ROI data to the Buffer

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